Transcript: LINC00547:2

Basic information

LNCipedia transcript ID: LINC00547:2 
LNCipedia gene ID: LINC00547
Location (hg38): chr13:37534401-37535154
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 754 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000014417.1|FTMT25200001363.1
Alternative gene names: FLJ34747


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -161.6057 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00547:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00547:2
5.0 LINC00547:2
5.1 LINC00547:2
5.2 LINC00547:2