Transcript: LINC00525:2

Basic information

LNCipedia transcript ID: LINC00525:2 
LNCipedia gene ID: LINC00525
Location (hg38): chr7:47763349-47766771
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1173 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000541385.1; LINC00525-201; NONHSAT120519
Alternative gene names: ENSG00000146666.4; LINC00525; OTTHUMG00000155644.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.8026 non-coding 
CPAT coding probability 4.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00525:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C7orf69-1:2
4.0 LINC00525:2
4.1 LINC00525:2
5.0 LINC00525:2
5.1 LINC00525:2
5.2 LINC00525:2