Transcript: LINC00517:3

Basic information

LNCipedia transcript ID: LINC00517:3 
LNCipedia gene ID: LINC00517
Location (hg38): chr14:37896060-37902125
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3461 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259091.1|ENST00000554257.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -157.4844 non-coding 
CPAT coding probability 3.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00517:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00517:3
5.0 LINC00517:3
5.1 LINC00517:3
5.2 LINC00517:3