Transcript: LINC00504:6

Basic information

LNCipedia transcript ID: LINC00504:6 
HGNC Gene Symbol: LINC00504    
HGNC Full Gene Name: long intergenic non-protein coding RNA 504
Ensembl Gene ID: ENSG00000248360
Ensembl Transcript ID: ENST00000509654
Location (hg38): chr4:14474085-14888167
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 822 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000509654.5
Alternative gene names: ENSG00000248360.7; LINC00504;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.0908 non-coding 
CPAT coding probability 54.23% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00504:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC00504:6
4.1 LINC00504:6
5.0 LINC00504:6
5.1 LINC00504:6
5.2 LINC00504:6