Transcript: LINC00501:2

Basic information

LNCipedia transcript ID: LINC00501:2 
LNCipedia gene ID: LINC00501
RefSeq ID: NR_047465
Location (hg38): chr3:177294442-177323435
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2063 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_047465; NR_047465.1
Alternative gene names: ; LINC00501


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.8469 non-coding 
CPAT coding probability 3.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00501:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCNMB2-6:2
4.0 LINC00501:2
4.1 LINC00501:2
5.0 LINC00501:2
5.1 LINC00501:2
5.2 LINC00501:2