Transcript: LINC00491:9

Basic information

LNCipedia transcript ID: LINC00491:9 
LNCipedia gene ID: LINC00491
Location (hg38): chr5:102606789-102612421
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2021 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT103032
Alternative gene names: BC008363


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.7233 non-coding 
CPAT coding probability 2.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00491:9 no no no no

Available literature

  1. Li (2014), Long non-coding RNAs expressed in pancreatic ductal adenocarcinoma and lncRNA BC008363 an independent prognostic factor in PDAC., Pancreatology


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLCO6A1-1:9
4.0 LINC00491:9
4.1 LINC00491:9
5.0 LINC00491:9
5.1 LINC00491:9
5.2 LINC00491:9