Transcript: LINC00491:6

Basic information

LNCipedia transcript ID: LINC00491:6 
LNCipedia gene ID: LINC00491
RefSeq ID: NR_103755
Location (hg38): chr5:102608492-102671464
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1584 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT103036; NR_103755; NR_103755.1
Alternative gene names: BC008363; LINC00491


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.6203 non-coding 
CPAT coding probability 4.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00491:6 no no no no

Available literature

  1. Li (2014), Long non-coding RNAs expressed in pancreatic ductal adenocarcinoma and lncRNA BC008363 an independent prognostic factor in PDAC., Pancreatology


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLCO6A1-1:5
4.0 LINC00491:6
4.1 LINC00491:6
5.0 LINC00491:6
5.1 LINC00491:6
5.2 LINC00491:6