Transcript: LINC00484:8

Basic information

LNCipedia transcript ID: LINC00484:8 
HGNC Gene Symbol: LINC00484    
HGNC Full Gene Name: long intergenic non-protein coding RNA 484
Ensembl Gene ID: ENSG00000235641
Ensembl Transcript ID: ENST00000588550
Location (hg38): chr9:91162498-91163331
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 834 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT133118; ENST00000588550.1
Alternative gene names: ENSG00000235641.3; LINC00484; ENSG00000235641.4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.2217 non-coding 
CPAT coding probability 5.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00484:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SYK-5:9
4.0 LINC00484:8
4.1 LINC00484:8
5.0 LINC00484:8
5.1 LINC00484:8
5.2 LINC00484:8