Transcript: LINC00484:10

Basic information

LNCipedia transcript ID: LINC00484:10 
LNCipedia gene ID: LINC00484
Location (hg38): chr9:91170672-91182717
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 562 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000414768; ENST00000414768.1; RP11-305L7.6-002; OTTHUMT00000053028.1; NONHSAT133121
Alternative gene names: ENSG00000229694; RP11-305L7.6; ENSG00000229694.1; OTTHUMG00000020205.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.8687 non-coding 
CPAT coding probability 1.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00484:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SYK-4:3
3.1 lnc-SYK-5:3
4.0 LINC00484:10
4.1 LINC00484:10
5.0 LINC00484:10
5.1 LINC00484:10
5.2 LINC00484:10