Transcript: LINC00458:24

Basic information

LNCipedia transcript ID: LINC00458:24 
LNCipedia gene ID: LINC00458
RefSeq ID: NR_108063
Location (hg38): chr13:54126862-54132871
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1025 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_108063.1
Alternative gene names: LINC00458


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 26.363 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00458:24 no no no no

Available literature

  1. Kapusta (2013), Transposable elements are major contributors to the origin, diversification, and regulation of vertebrate long noncoding RNAs., PLoS Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC00458:24
5.1 LINC00458:24
5.2 LINC00458:24