Transcript: LINC00446:4

Basic information

LNCipedia transcript ID: LINC00446:4 
LNCipedia gene ID: LINC00446
Location (hg38): chr13:78029980-78037219
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 247 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000414743; ENST00000414743.1; LINC00446-002; OTTHUMT00000045356.1; NONHSAT140140
Alternative gene names: ENSG00000229249; RP11-267I18.1; ENSG00000229249.1; LINC00446; OTTHUMG00000017115.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -274.5627 non-coding 
CPAT coding probability 2.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00446:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLAIN1-2:1
3.1 lnc-SLAIN1-2:1
4.0 LINC00446:4
4.1 LINC00446:4
5.0 LINC00446:4
5.1 LINC00446:4
5.2 LINC00446:4