Transcript: LINC00426:23

Basic information

LNCipedia transcript ID: LINC00426:23 
LNCipedia gene ID: LINC00426
Location (hg38): chr13:30345433-30363376
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 510 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021953; NONHSAT032786
Alternative gene names: XLOC_010556; linc-KATNAL1-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.6167 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00426:23 no no no no

Available literature

  1. Wang (2015), Expression profile of long non-coding RNAs in pancreatic cancer and their clinical significance as biomarkers., Oncotarget
  2. You (2014), Noncoding RNA small nucleolar RNA host gene 1 promote cell proliferation in nonsmall cell lung cancer., Indian J Cancer


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KATNAL1-3:21
3.1 lnc-KATNAL1-3:21
4.0 LINC00426:23
4.1 LINC00426:23
5.0 LINC00426:23
5.1 LINC00426:23
5.2 LINC00426:23