Transcript: LINC00408:3

Basic information

LNCipedia transcript ID: LINC00408:3 
LNCipedia gene ID: LINC00408
RefSeq ID: NR_104118
Location (hg38): chr13:18905439-18926741
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1081 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT032224; NR_104118; NR_104118.1
Alternative gene names: ; LINC00408


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 28.7685 non-coding 
CPAT coding probability 5.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00408:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-408E5.4.1-6:5
4.0 LINC00408:3
4.1 LINC00408:3
5.0 LINC00408:3
5.1 LINC00408:3
5.2 LINC00408:3