Transcript: LINC00384:1

Basic information

LNCipedia transcript ID: LINC00384:1 
HGNC Gene Symbol: LINC00384    
HGNC Full Gene Name: long intergenic non-protein coding RNA 384
Ensembl Gene ID: ENSG00000232117
Ensembl Transcript ID: ENST00000437721
Location (hg38): chr13:30151886-30159621
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6852 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00021618; ENST00000437721; ENST00000437721.1; RP11-490N5.2-001; OTTHUMT00000125972.1; NONHSAT032766
Alternative gene names: XLOC_010554; linc-UBL3-1; ENSG00000232117; RP11-490N5.2; ENSG00000232117.1; OTTHUMG00000055982.1; LINC00384;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.2636 non-coding 
CPAT coding probability 12.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00384:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KATNAL1-2:1
3.1 lnc-KATNAL1-2:1
4.0 LINC00384:1
4.1 LINC00384:1
5.0 LINC00384:1
5.1 LINC00384:1
5.2 LINC00384:1