Transcript: LINC00375:5

Basic information

LNCipedia transcript ID: LINC00375:5 
HGNC Gene Symbol: LINC00375    
HGNC Full Gene Name: long intergenic non-protein coding RNA 375
Ensembl Gene ID: ENSG00000226370
Ensembl Transcript ID: ENST00000433074
Location (hg38): chr13:85065087-85078920
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 601 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000433074; ENST00000433074.1; RP11-531P20.1-001; OTTHUMT00000045402.1
Alternative gene names: ENSG00000226370; RP11-531P20.1; ENSG00000226370.1; OTTHUMG00000017155.1; LINC00375;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -143.6285 non-coding 
CPAT coding probability 2.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00375:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLITRK6-4:1
3.1 lnc-SLITRK6-4:1
4.0 LINC00375:5
4.1 LINC00375:5
5.0 LINC00375:5
5.1 LINC00375:5
5.2 LINC00375:5