Transcript: LINC00358:4

Basic information

LNCipedia transcript ID: LINC00358:4 
LNCipedia gene ID: LINC00358
Location (hg38): chr13:62004134-62025481
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 475 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022036; NONHSAT034138
Alternative gene names: XLOC_010635; linc-PCDH20-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.2222 non-coding 
CPAT coding probability 8.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00358:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PCDH20-1:2
3.1 lnc-PCDH20-1:2
4.0 LINC00358:4
4.1 LINC00358:4
5.0 LINC00358:4
5.1 LINC00358:4
5.2 LINC00358:4