Transcript: LINC00355:1

Basic information

LNCipedia transcript ID: LINC00355:1 
HGNC Gene Symbol: LINC00355    
HGNC Full Gene Name: long intergenic non-protein coding RNA 355
Ensembl Gene ID: ENSG00000227674
Ensembl Transcript ID: ENST00000456627
Location (hg38): chr13:63986371-64076011
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1878 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000456627; ENST00000456627.1; LINC00355-001; OTTHUMT00000045202.1; NONHSAT034189
Alternative gene names: ENSG00000227674; RP11-520F9.2; ENSG00000227674.1; LINC00355; OTTHUMG00000017028.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 36.6135 non-coding 
CPAT coding probability 7.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00355:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PCDH9-4:1
3.1 lnc-PCDH9-4:1
4.0 LINC00355:1
4.1 LINC00355:1
5.0 LINC00355:1
5.1 LINC00355:1
5.2 LINC00355:1