Transcript: LINC00354:6

Basic information

LNCipedia transcript ID: LINC00354:6 
LNCipedia gene ID: LINC00354
Location (hg38): chr13:111897209-111901216
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 815 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT035239; FPKM1_group_8459_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.1768 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00354:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SOX1-4:7
4.0 LINC00354:6
4.1 LINC00354:6
5.0 LINC00354:6
5.1 LINC00354:6
5.2 LINC00354:6