Transcript: LINC00322:2

Basic information

LNCipedia transcript ID: LINC00322:2 
LNCipedia gene ID: LINC00322
RefSeq ID: NR_103713
Location (hg38): chr21:43322209-43332039
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 907 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT082395; NR_103713; NR_103713.2
Alternative gene names: FLJ16545; LINC00322


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -57.411 non-coding 
CPAT coding probability 13.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00322:2 no no no no

Available literature

  1. Olsen (2006), Global, in vivo, and site-specific phosphorylation dynamics in signaling networks., Cell


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SIK1-6:2
4.0 LINC00322:2
4.1 LINC00322:2
5.0 LINC00322:2
5.1 LINC00322:2
5.2 LINC00322:2