Transcript: LINC00320:5

Basic information

LNCipedia transcript ID: LINC00320:5 
LNCipedia gene ID: LINC00320
Location (hg38): chr21:20735760-20803302
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1936 bp
Exons: 8
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029087; NONHSAT081353
Alternative gene names: XLOC_014019; linc-TMPRSS15-5; PRED14; FLJ37539


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.0963 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00320:5 no no no no

Available literature

  1. Mills (2015), Long intervening non-coding RNA 00320 is human brain-specific and highly expressed in the cortical white matter., Neurogenetics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMPRSS15-9:3
3.1 lnc-TMPRSS15-9:3
4.0 LINC00320:5
4.1 LINC00320:5
5.0 LINC00320:5
5.1 LINC00320:5
5.2 LINC00320:5