Transcript: LINC00265:9

Basic information

LNCipedia transcript ID: LINC00265:9 
LNCipedia gene ID: LINC00265
Location (hg38): chr7:39781184-39782112
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 708 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013423; NONHSAT120226
Alternative gene names: XLOC_006058; linc-CDK13-1; NCRNA00265-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.1536 non-coding 
CPAT coding probability 3.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00265:9 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RALA-1:3
3.1 lnc-RALA-1:3
4.0 LINC00265:9
4.1 LINC00265:9
5.0 LINC00265:9
5.1 LINC00265:9
5.2 LINC00265:9