Transcript: LINC00265:16

Basic information

LNCipedia transcript ID: LINC00265:16 
LNCipedia gene ID: LINC00265
Location (hg38): chr7:39791901-39794617
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2179 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000512765; ENST00000512765.2; LINC00265-201
Alternative gene names: ENSG00000188185; NCRNA00265; ENSG00000188185.6; LINC00265; OTTHUMG00000155273.1; NCRNA00265-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 320.3553 coding 
CPAT coding probability 99.98% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00265:16 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RALA-1:8
3.1 lnc-RALA-1:8
4.0 LINC00265:16
4.1 LINC00265:16
5.0 LINC00265:16
5.1 LINC00265:16
5.2 LINC00265:16