Transcript: LINC00244:1

Basic information

LNCipedia transcript ID: LINC00244:1 
LNCipedia gene ID: LINC00244
Ensembl Gene ID: ENSG00000279418
Ensembl Transcript ID: ENST00000625073
Location (hg38): chr7:156540491-156541103
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 613 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT124419; ENST00000625073.1
Alternative gene names: ENSG00000279418.1; LINC00244;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -223.327 non-coding 
CPAT coding probability 9.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00244:1 no no no no

Available literature

  1. Heus (1999), A physical and transcriptional map of the preaxial polydactyly locus on chromosome 7q36., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNF32-5:1
4.0 LINC00244:1
4.1 LINC00244:1
5.0 LINC00244:1
5.1 LINC00244:1
5.2 LINC00244:1