Transcript: LINC00226:4

Basic information

LNCipedia transcript ID: LINC00226:4 
HGNC Gene Symbol: LINC00226    
HGNC Full Gene Name: long intergenic non-protein coding RNA 226
Ensembl Gene ID: ENSG00000276210
Ensembl Transcript ID: ENST00000611530
Location (hg38): chr14:106287720-106288372
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 572 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000611530.1
Alternative gene names: ENSG00000276210.2; LINC00226


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00226:4 no no no no

Available literature

  1. Yu (2017), Analysis of distinct long noncoding RNA transcriptional fingerprints in pancreatic ductal adenocarcinoma., Cancer Med


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC00226:4
5.1 LINC00226:4
5.2 LINC00226:4