Transcript: LINC00200:3

Basic information

LNCipedia transcript ID: LINC00200:3 
LNCipedia gene ID: LINC00200
Location (hg38): chr10:1159808-1160677
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 308 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00018662
Alternative gene names: XLOC_008338; linc-PFKP-7; FLJ40354


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.4547 non-coding 
CPAT coding probability 6.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00200:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WDR37-1:2
3.1 lnc-WDR37-1:3
4.0 LINC00200:3
4.1 LINC00200:3
5.0 LINC00200:3
5.1 LINC00200:3
5.2 LINC00200:3