Transcript: LINC00174:2

Basic information

LNCipedia transcript ID: LINC00174:2 
LNCipedia gene ID: LINC00174
Location (hg38): chr7:66389391-66401062
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1257 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT121169
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.4787 non-coding 
CPAT coding probability 2.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00174:2 yes no no no

Available literature

  1. Shen (2018), STAT1-mediated upregulation of lncRNA LINC00174 functions a ceRNA for miR-1910-3p to facilitate colorectal carcinoma progression through regulation of TAZ., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GUSB-6:5
4.0 LINC00174:2
4.1 LINC00174:2
5.0 LINC00174:2
5.1 LINC00174:2
5.2 LINC00174:2