Transcript: LINC00102:2

Basic information

LNCipedia transcript ID: LINC00102:2 
LNCipedia gene ID: LINC00102
RefSeq ID: NR_037842
Location (hg38): chrX:2612991-2615347
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1337 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_037842; NR_037842.1
Alternative gene names: OTTHUMT00000055623; LINC00102


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.0825 non-coding 
CPAT coding probability 1.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00102:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHRSX-2:2
4.0 LINC00102:2
4.1 LINC00102:2
5.0 LINC00102:2
5.1 LINC00102:2
5.2 LINC00102:2