Transcript: LINC00092:8

Basic information

LNCipedia transcript ID: LINC00092:8 
LNCipedia gene ID: LINC00092
RefSeq ID: NR_024129
Location (hg38): chr9:96019732-96021755
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1721 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_024129; NR_024129.1
Alternative gene names: bA346B7.1; LINC00092


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.2304 non-coding 
CPAT coding probability 23.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00092:8 no no no no

Available literature

  1. Zhao (2017), Long Noncoding RNA LINC00092 Acts in Cancer-Associated Fibroblasts to Drive Glycolysis and Progression of Ovarian Cancer., Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSD17B3-1:8
4.0 LINC00092:8
4.1 LINC00092:8
5.0 LINC00092:8
5.1 LINC00092:8
5.2 LINC00092:8