Transcript: LINC00092:6

Basic information

LNCipedia transcript ID: LINC00092:6 
LNCipedia gene ID: LINC00092
Location (hg38): chr9:96020594-96021760
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 864 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000412122
Alternative gene names: ENSG00000225194; NCRNA00092; bA346B7.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -245.8293 non-coding 
CPAT coding probability 24.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00092:6 no no no no

Available literature

  1. Zhao (2017), Long Noncoding RNA LINC00092 Acts in Cancer-Associated Fibroblasts to Drive Glycolysis and Progression of Ovarian Cancer., Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HSD17B3-1:1
3.1 lnc-HSD17B3-1:4
4.0 LINC00092:6
4.1 LINC00092:6
5.0 LINC00092:6
5.1 LINC00092:6
5.2 LINC00092:6