Transcript: LIN28B-AS1:3

Basic information

LNCipedia transcript ID: LIN28B-AS1:3 
LNCipedia gene ID: LIN28B-AS1
Location (hg38): chr6:104902063-104941437
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2056 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000203809.5|MICT00000308840.1
Alternative gene names: dJ439I14.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.3447 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LIN28B-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LIN28B-AS1:3
5.0 LIN28B-AS1:3
5.1 LIN28B-AS1:3
5.2 LIN28B-AS1:3