Transcript: LHFPL3-AS1:9

Basic information

LNCipedia transcript ID: LHFPL3-AS1:9 
LNCipedia gene ID: LHFPL3-AS1
Location (hg38): chr7:104797778-104801377
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3600 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: l_3463_NR_024586
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -138.7916 non-coding 
CPAT coding probability 4.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LHFPL3-AS1:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SRPK2-4:10
4.0 LHFPL3-AS1:9
4.1 LHFPL3-AS1:9
5.0 LHFPL3-AS1:9
5.1 LHFPL3-AS1:9
5.2 LHFPL3-AS1:9