Transcript: LDLRAD4-AS1:2

Basic information

LNCipedia transcript ID: LDLRAD4-AS1:2 
HGNC Gene Symbol: LDLRAD4-AS1    
HGNC Full Gene Name: LDLRAD4 antisense RNA 1
Ensembl Gene ID: ENSG00000267690
Ensembl Transcript ID: ENST00000588672
Location (hg38): chr18:13419421-13427480
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2190 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT058428; ENST00000588672.1
Alternative gene names: ENSG00000267690.1; LDLRAD4-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.605 non-coding 
CPAT coding probability 9.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LDLRAD4-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM210A-8:2
4.0 LDLRAD4-AS1:2
4.1 LDLRAD4-AS1:2
5.0 LDLRAD4-AS1:2
5.1 LDLRAD4-AS1:2
5.2 LDLRAD4-AS1:2