Transcript: LCMT1-AS1:2

Basic information

LNCipedia transcript ID: LCMT1-AS1:2 
LNCipedia gene ID: LCMT1-AS1
RefSeq ID: NR_120306
Location (hg38): chr16:25100564-25111555
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 573 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120306; NR_120306.1
Alternative gene names: ; LCMT1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -68.8275 non-coding 
CPAT coding probability 7.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LCMT1-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARHGAP17-2:5
4.0 LCMT1-AS1:2
4.1 LCMT1-AS1:2
5.0 LCMT1-AS1:2
5.1 LCMT1-AS1:2
5.2 LCMT1-AS1:2