Transcript: LCMT1-AS1:17

Basic information

LNCipedia transcript ID: LCMT1-AS1:17 
LNCipedia gene ID: LCMT1-AS1
Location (hg38): chr16:25067127-25107097
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 18855 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260448.1|MICT00000129125.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 60.3013 non-coding 
CPAT coding probability 6.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LCMT1-AS1:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LCMT1-AS1:17
5.0 LCMT1-AS1:17
5.1 LCMT1-AS1:17
5.2 LCMT1-AS1:17