Transcript: LARS2-AS1:2

Basic information

LNCipedia transcript ID: LARS2-AS1:2 
LNCipedia gene ID: LARS2-AS1
RefSeq ID: NR_048543
Location (hg38): chr3:45482695-45509545
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1854 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT089391; NR_048543; NR_048543.1
Alternative gene names: ; LARS2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.9382 non-coding 
CPAT coding probability 20.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LARS2-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC6A20-2:2
4.0 LARS2-AS1:2
4.1 LARS2-AS1:2
5.0 LARS2-AS1:2
5.1 LARS2-AS1:2
5.2 LARS2-AS1:2