Transcript: KLF3-AS1:6

Basic information

LNCipedia transcript ID: KLF3-AS1:6 
HGNC Gene Symbol: KLF3-AS1    
HGNC Full Gene Name: KLF3 antisense RNA 1
Ensembl Gene ID: ENSG00000231160
Ensembl Transcript ID: ENST00000440181
RefSeq ID: NR_026804
Location (hg38): chr4:38612701-38664628
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2368 bp
Exons: 8
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000440181.1; RP11-617D20.1-001; OTTHUMT00000360420.2; NONHSAT096045; NR_026804; ENST00000440181.5; NR_026804.1
Alternative gene names: ENSG00000231160.3; RP11-617D20.1; OTTHUMG00000160386.3; ENSG00000231160.5; ENSG00000231160.9; KLF3-AS1; FLJ13197


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.9361 non-coding 
CPAT coding probability 27.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KLF3-AS1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC021860.1-2:3
4.0 KLF3-AS1:6
4.1 KLF3-AS1:6
5.0 KLF3-AS1:6
5.1 KLF3-AS1:6
5.2 KLF3-AS1:6