Transcript: KIRREL3-AS2:2

Basic information

LNCipedia transcript ID: KIRREL3-AS2:2 
LNCipedia gene ID: KIRREL3-AS2
RefSeq ID: NR_046986
Location (hg38): chr11:126940746-126945090
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 494 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT025036; NR_046986; NR_046986.1
Alternative gene names: ; KIRREL3-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.0807 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KIRREL3-AS2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-688I9.2.1-4:3
4.0 KIRREL3-AS2:2
4.1 KIRREL3-AS2:2
5.0 KIRREL3-AS2:2
5.1 KIRREL3-AS2:2
5.2 KIRREL3-AS2:2