Transcript: KDM4A-AS1:3

Basic information

LNCipedia transcript ID: KDM4A-AS1:3 
LNCipedia gene ID: KDM4A-AS1
Location (hg38): chr1:43699738-43707341
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1560 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT002817; NR_033827
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.8508 non-coding 
CPAT coding probability 14.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KDM4A-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HYI-2:6
4.0 KDM4A-AS1:3
4.1 KDM4A-AS1:3
5.0 KDM4A-AS1:3
5.1 KDM4A-AS1:3
5.2 KDM4A-AS1:3