Transcript: KCNMA1-AS2:2

Basic information

LNCipedia transcript ID: KCNMA1-AS2:2 
LNCipedia gene ID: KCNMA1-AS2
RefSeq ID: NR_120654
Location (hg38): chr10:77140831-77150100
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 445 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120654; NR_120654.1
Alternative gene names: ; KCNMA1-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -23.3008 non-coding 
CPAT coding probability 10.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KCNMA1-AS2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf11-5:4
4.0 KCNMA1-AS2:2
4.1 KCNMA1-AS2:2
5.0 KCNMA1-AS2:2
5.1 KCNMA1-AS2:2
5.2 KCNMA1-AS2:2