Transcript: KCNAB1-AS2:1

Basic information

LNCipedia transcript ID: KCNAB1-AS2:1 
HGNC Gene Symbol: KCNAB1-AS2    
HGNC Full Gene Name: KCNAB1 antisense RNA 2
Ensembl Gene ID: ENSG00000240596
Ensembl Transcript ID: ENST00000473876
RefSeq ID: NR_046617
Location (hg38): chr3:156215560-156227883
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 538 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000473876.1; KCNAB1-AS2-001; OTTHUMT00000351257.1; NONHSAT092852; NR_046617; NR_046617.1
Alternative gene names: ENSG00000240596.1; KCNAB1-AS2; OTTHUMG00000158548.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.2487 non-coding 
CPAT coding probability 2.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KCNAB1-AS2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SSR3-4:1
4.0 KCNAB1-AS2:1
4.1 KCNAB1-AS2:1
5.0 KCNAB1-AS2:1
5.1 KCNAB1-AS2:1
5.2 KCNAB1-AS2:1