Transcript: ITPR1-DT:14

Basic information

LNCipedia transcript ID: ITPR1-DT:14 
HGNC Gene Symbol: ITPR1-DT    
HGNC Full Gene Name: ITPR1 divergent transcript
Ensembl Gene ID: ENSG00000231249
Ensembl Transcript ID: ENST00000412804
Location (hg38): chr3:4490891-4493163
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 858 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00005727; ENST00000412804.1; AC024168.2-001; OTTHUMT00000337977.1; NONHSAT087630
Alternative gene names: XLOC_003021; linc-SUMF1-4; ENSG00000231249.1; AC024168.2; OTTHUMG00000154994.1; ITPR1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -171.2236 non-coding 
CPAT coding probability 1.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ITPR1-DT:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SUMF1-1:1
3.1 lnc-SUMF1-1:1
4.0 ITPR1-AS1:1
4.1 ITPR1-AS1:1
5.0 ITPR1-AS1:1
5.1 ITPR1-DT:6
5.2 ITPR1-DT:14