Transcript: ITGA9-AS1:40

Basic information

LNCipedia transcript ID: ITGA9-AS1:40 
LNCipedia gene ID: ITGA9-AS1
Location (hg38): chr3:37753689-37861768
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 608 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235257.4|ENST00000438136.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -340.1153 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ITGA9-AS1:40 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 ITGA9-AS1:40
5.0 ITGA9-AS1:40
5.1 ITGA9-AS1:40
5.2 ITGA9-AS1:40