Transcript: INTS6L-AS1:1

Basic information

LNCipedia transcript ID: INTS6L-AS1:1 
HGNC Gene Symbol: INTS6L-AS1    
HGNC Full Gene Name: INTS6L antisense RNA 1
Ensembl Gene ID: ENSG00000225235
Ensembl Transcript ID: ENST00000430820
RefSeq ID: NR_046740
Location (hg38): chrX:135520083-135520674
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 398 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000430820.1; DDX26B-AS1-001; OTTHUMT00000058419.1; NONHSAT138703; NR_046740; NR_046740.1
Alternative gene names: ENSG00000225235.1; DDX26B-AS1; OTTHUMG00000022483.1; ; INTS6L-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -107.4122 non-coding 
CPAT coding probability 8.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
INTS6L-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF75D-1:1
4.0 INTS6L-AS1:1
4.1 INTS6L-AS1:1
5.0 INTS6L-AS1:1
5.1 INTS6L-AS1:1
5.2 INTS6L-AS1:1