Transcript: INTS6-AS1:48

Basic information

LNCipedia transcript ID: INTS6-AS1:48 
LNCipedia gene ID: INTS6-AS1
Location (hg38): chr13:51453346-51506638
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 685 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236778.3|ENST00000593709.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.7969 non-coding 
CPAT coding probability 3.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
INTS6-AS1:48 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 INTS6-AS1:48
5.0 INTS6-AS1:48
5.1 INTS6-AS1:48
5.2 INTS6-AS1:48