Transcript: IGFBP7-AS1:5

Basic information

LNCipedia transcript ID: IGFBP7-AS1:5 
LNCipedia gene ID: IGFBP7-AS1
Location (hg38): chr4:57151756-57157992
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 427 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00008794
Alternative gene names: XLOC_003547; linc-LPHN3-8;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -222.6343 non-coding 
CPAT coding probability 14.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IGFBP7-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POLR2B-1:1
3.1 lnc-POLR2B-1:3
4.0 IGFBP7-AS1:5
4.1 IGFBP7-AS1:5
5.0 IGFBP7-AS1:5
5.1 IGFBP7-AS1:5
5.2 IGFBP7-AS1:5