Transcript: IDH2-DT:18

Basic information

LNCipedia transcript ID: IDH2-DT:18 
LNCipedia gene ID: IDH2-DT
Location (hg38): chr15:90102649-90133442
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 352 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000561101.1; CTD-2315E11.1-001; OTTHUMT00000417311.1; NONHSAT048366
Alternative gene names: ENSG00000259685.1; CTD-2315E11.1; OTTHUMG00000172203.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.9985 non-coding 
CPAT coding probability 2.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IDH2-DT:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SEMA4B-1:1
4.0 lnc-ZNF710-4:1
4.1 lnc-ZNF710-4:1
5.0 lnc-ZNF710-4:1
5.1 IDH2-DT:8
5.2 IDH2-DT:18