Transcript: IDH1-AS1:5

Basic information

LNCipedia transcript ID: IDH1-AS1:5 
LNCipedia gene ID: IDH1-AS1
Location (hg38): chr2:208255229-208256181
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 482 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231908.1|ENST00000440574.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.7932 non-coding 
CPAT coding probability 4.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IDH1-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 IDH1-AS1:5
5.0 IDH1-AS1:5
5.1 IDH1-AS1:5
5.2 IDH1-AS1:5