Transcript: HTR5A-AS1:3

Basic information

LNCipedia transcript ID: HTR5A-AS1:3 
LNCipedia gene ID: HTR5A-AS1
Location (hg38): chr7:155067069-155071557
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2701 bp
Exons: 2
Sources: Refseq - Dec 2014
Alternative transcript names: NR_038945
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 636.9478 coding 
CPAT coding probability 81.36% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
HTR5A-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC093726.4.1-1:2
4.0 HTR5A-AS1:3
4.1 HTR5A-AS1:3
5.0 HTR5A-AS1:3
5.1 HTR5A-AS1:3
5.2 HTR5A-AS1:3