Transcript: HTR5A-AS1:1

Basic information

LNCipedia transcript ID: HTR5A-AS1:1 
LNCipedia gene ID: HTR5A-AS1
Location (hg38): chr7:155070838-155071676
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 839 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT124341
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 483.6756 coding 
CPAT coding probability 93.17% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
HTR5A-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC093726.4.1-1:1
4.0 HTR5A-AS1:1
4.1 HTR5A-AS1:1
5.0 HTR5A-AS1:1
5.1 HTR5A-AS1:1
5.2 HTR5A-AS1:1