Transcript: HHATL-AS1:2

Basic information

LNCipedia transcript ID: HHATL-AS1:2 
LNCipedia gene ID: HHATL-AS1
Location (hg38): chr3:42702711-42706662
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 719 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT089258; ENST00000600839.1
Alternative gene names: ENSG00000230970.2; HHATL-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -57.8873 non-coding 
CPAT coding probability 1.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HHATL-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KBTBD5-1:2
4.0 HHATL-AS1:2
4.1 HHATL-AS1:2
5.0 HHATL-AS1:2
5.1 HHATL-AS1:2
5.2 HHATL-AS1:2